MLOC_71096 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1243690.03632240.09475950.086207
LEAShoots from the seedlings (10 cm shoot stage)0.2760130.2660970.1989950.207287
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)50.44329.62739.53237.9493
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.03601730.03420600.0595375
CAR15Developing grain, bracts removed (15 DPA)00.029861100.112672



CDS Structure of MLOC_71096






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71096.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71096.1CUST_15623_PI427708080AvailableAvailablecontig_59141 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01270.1 -1 2e-142 414 191/239 (80%) 13103.m00042 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 -1 3e-69 223 115/232 (50%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273