MLOC_71066 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8760071.005221.042381.12895
LEAShoots from the seedlings (10 cm shoot stage)0.1349290.07830680.04106260.0734009
INF1Young developing inflorescences (5mm)5.258566.604335.396265.64937
INF2Developing inflorescences (1-1.5 cm)6.911747.524197.685029.10813
ROORoots from the seedlings (10 cm shoot stage)2.792172.273021.967722.82975
NODDeveloping tillers at six leaf stage, 3rd internode0.2955460.1183920.4718690.510016
CAR5Developing grain, bracts removed (5 DPA)3.576033.791843.548094.10253
CAR15Developing grain, bracts removed (15 DPA)0.3979160.1872250.3924890.835646



CDS Structure of MLOC_71066






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71066.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377172NoneNoneNoneNone
MLOC_71066.1CUST_5989_PI427708080AvailableAvailablecontig_59074 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16810.1 +2 4e-81 263 151/229 (66%) 13101.m01878 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G26780.1 +2 5e-61 207 94/118 (80%) | Symbols: MYB117, AtMYB117, LOF1 | myb domain protein 117 | chr1:9271033-9272128 FORWARD LENGTH=280