- Predicted Gene MLOC_71054
MLOC_71054 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71054_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71054_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.406317 | 0.454843 | 0.42676 | 0.441704 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.3589 | 0.507551 | 0.666235 | 0.779099 |
INF1 | Young developing inflorescences (5mm) | 2.27841 | 2.51866 | 3.40988 | 2.06662 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.1456 | 1.10711 | 0.626053 | 1.11265 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.169155 | 0.582639 | 0.325359 | 0.63875 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.34264 | 0.701468 | 1.54766 | 2.88278 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.751062 | 0.840034 | 0.62603 | 0.68239 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.305935 | 0.20904 | 0.152004 | 0.550422 |
CDS Structure of MLOC_71054
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71054.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g62040.1 |
-2 |
8e-63 |
206 |
115/156 (74%) |
13101.m06631 protein ruvB-like, putative, expressed |
TAIR PP10 |
AT5G22330.1 |
-2 |
2e-53 |
181 |
94/157 (60%) |
| Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458 |