MLOC_71053 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.788227.145529.529628.092
LEAShoots from the seedlings (10 cm shoot stage)12.39511.358542.876374.52808
INF1Young developing inflorescences (5mm)20.740120.934920.691118.3499
INF2Developing inflorescences (1-1.5 cm)8.9278811.205112.650712.0855
ROORoots from the seedlings (10 cm shoot stage)56.775535.182460.203643.3879
NODDeveloping tillers at six leaf stage, 3rd internode12.59867.135710.069504613.8855
CAR5Developing grain, bracts removed (5 DPA)12.895413.85211.343112.694
CAR15Developing grain, bracts removed (15 DPA)4.864833.677095.1263411.2808



CDS Structure of MLOC_71053






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71053.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362123NoneNoneNoneNone
MLOC_71053.1CUST_18409_PI427708080AvailableAvailablecontig_59051 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50030.1 -2 3e-59 196 107/135 (79%) 13103.m05439 protein phospholipase A2, putative, expressed
TAIR PP10 AT2G06925.1 -2 2e-36 133 79/138 (57%) | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | Phospholipase A2 family protein | chr2:2842475-2843212 REVERSE LENGTH=148