- Predicted Gene MLOC_71053
MLOC_71053 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71053_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71053_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 33.7882 | 27.1455 | 29.5296 | 28.092 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.3951 | 1.35854 | 2.87637 | 4.52808 |
INF1 | Young developing inflorescences (5mm) | 20.7401 | 20.9349 | 20.6911 | 18.3499 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.92788 | 11.2051 | 12.6507 | 12.0855 |
ROO | Roots from the seedlings (10 cm shoot stage) | 56.7755 | 35.1824 | 60.2036 | 43.3879 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.5986 | 7.13571 | 0.0695046 | 13.8855 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.8954 | 13.852 | 11.3431 | 12.694 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.86483 | 3.67709 | 5.12634 | 11.2808 |
CDS Structure of MLOC_71053
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71053.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g50030.1 |
-2 |
3e-59 |
196 |
107/135 (79%) |
13103.m05439 protein phospholipase A2, putative, expressed |
TAIR PP10 |
AT2G06925.1 |
-2 |
2e-36 |
133 |
79/138 (57%) |
| Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | Phospholipase A2 family protein | chr2:2842475-2843212 REVERSE LENGTH=148 |