- Predicted Gene MLOC_71043
MLOC_71043 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.889293 | 1.56297 | 1.26985 | 1.33622 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.746748 | 0.130228 | 0.296653 | 0.359185 |
INF1 | Young developing inflorescences (5mm) | 2.92138 | 2.21455 | 2.29394 | 2.11775 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.91274 | 1.79488 | 1.99831 | 2.04591 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.914988 | 0.830175 | 1.01816 | 1.07757 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.103149 | 0.0482437 | 0.184467 | 0.252134 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.28039 | 1.89806 | 2.10478 | 1.71343 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.435584 | 0.324563 | 0.452177 | 0.906012 |
CDS Structure of MLOC_71043
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71043.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g49520.1 |
-1 |
0.0 |
1455 |
709/842 (84%) |
13104.m05057 protein pentatricopeptide repeat protein PPR868-14, putative, expressed |
TAIR PP10 |
AT2G22070.1 |
-1 |
7e-168 |
513 |
267/746 (36%) |
pentatricopeptide (PPR) repeat-containing protein | chr2:9383602-9385962 FORWARD LENGTH=786 |