MLOC_71041 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.058344.423244.346575.06955
LEAShoots from the seedlings (10 cm shoot stage)3.857584.091064.361773.41667
INF1Young developing inflorescences (5mm)0.07817020.164930.1013580.117274
INF2Developing inflorescences (1-1.5 cm)0.1299250.08353760.05084460.117377
ROORoots from the seedlings (10 cm shoot stage)4.624833.472523.348464.45555
NODDeveloping tillers at six leaf stage, 3rd internode14.015713.95873.0393929.7839
CAR5Developing grain, bracts removed (5 DPA)0.4953480.6198850.3438820.560232
CAR15Developing grain, bracts removed (15 DPA)0.3702620.5866480.4409891.35933



CDS Structure of MLOC_71041






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71041.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368728NoneNoneNoneNone
MLOC_71041.1CUST_18408_PI427708080AvailableAvailablecontig_59029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g35500.1 +2 2e-123 367 198/264 (75%) 13105.m03718 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT4G38620.1 +2 3e-82 261 137/254 (54%) | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282