MLOC_71031 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.771683.526982.796853.69356
LEAShoots from the seedlings (10 cm shoot stage)3.34725.344424.438394.00904
INF1Young developing inflorescences (5mm)2.028642.209782.927832.34002
INF2Developing inflorescences (1-1.5 cm)2.695793.022154.118954.05568
ROORoots from the seedlings (10 cm shoot stage)3.738154.654584.845116.38772
NODDeveloping tillers at six leaf stage, 3rd internode3.782291.578841.935814.5173
CAR5Developing grain, bracts removed (5 DPA)2.802393.52413.372723.84001
CAR15Developing grain, bracts removed (15 DPA)1.392991.217521.481253.76771



CDS Structure of MLOC_71031






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71031.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250689.1NoneNoneNoneNone
MLOC_71031.2CUST_5987_PI427708080AvailableAvailablecontig_58995 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g02110.1 -3 3e-32 118 74/117 (63%) 13111.m00131 protein expressed protein
TAIR PP10 AT2G30330.1 -3 6e-23 93 52/92 (57%) | Symbols: BLOS1 | GCN5L1 family protein | chr2:12929045-12929688 REVERSE LENGTH=152