- Predicted Gene MLOC_71004
MLOC_71004 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.1377 | 1.10194 | 0.938021 | 1.03142 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.7885 | 1.77239 | 1.83217 | 1.97051 |
| INF1 | Young developing inflorescences (5mm) | 0.131547 | 0.0299819 | 0.0679381 | 0.0644675 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0255692 | 0 | 0.0638693 | 0.0508957 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.752917 | 0.517973 | 0.931713 | 0.651758 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.95796 | 6.06258 | 7.95107 | 17.2226 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.22448 | 2.74929 | 2.91018 | 2.46803 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.9199 | 1.20003 | 1.64437 | 3.76438 |
CDS Structure of MLOC_71004
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71004.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g50990.3 |
-2 |
1e-51 |
179 |
144/188 (77%) |
13102.m05791 protein RING-H2 finger protein ATL1Q, putative, expressed |
| TAIR PP10 |
AT1G74410.1 |
-2 |
4e-21 |
94 |
51/124 (41%) |
RING/U-box superfamily protein | chr1:27965723-27967681 FORWARD LENGTH=223 |