MLOC_70973 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.026317.142715.946919.889
LEAShoots from the seedlings (10 cm shoot stage)26.576316.153518.005120.5775
INF1Young developing inflorescences (5mm)26.645726.696527.042225.9236
INF2Developing inflorescences (1-1.5 cm)25.332231.809329.530638.2004
ROORoots from the seedlings (10 cm shoot stage)11.123216.61511.450325.1274
NODDeveloping tillers at six leaf stage, 3rd internode10.744112.009514.875653.8626
CAR5Developing grain, bracts removed (5 DPA)20.497719.80819.310823.6682
CAR15Developing grain, bracts removed (15 DPA)14.521515.27613.940839.0852



CDS Structure of MLOC_70973






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70973.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252519.1NoneNoneNoneNone
MLOC_70973.1CUST_5978_PI427708080AvailableAvailablecontig_58866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41910.1 -1 0.0 696 378/488 (77%) 13104.m04121 protein RNA recognition motif containing protein, putative, expressed
TAIR PP10 AT5G16260.1 -1 4e-153 456 268/520 (52%) | Symbols: ELF9 | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:5311363-5315496 FORWARD LENGTH=519