MLOC_70967 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains98.323398.187592.7153100.106
LEAShoots from the seedlings (10 cm shoot stage)65.760924.859626.442734.4062
INF1Young developing inflorescences (5mm)108.66794.771188.699484.6716
INF2Developing inflorescences (1-1.5 cm)43.681151.142250.697254.3661
ROORoots from the seedlings (10 cm shoot stage)88.242889.383471.1482108.63
NODDeveloping tillers at six leaf stage, 3rd internode84.645875.555442.1583247.921
CAR5Developing grain, bracts removed (5 DPA)124.253116.074111.804117.253
CAR15Developing grain, bracts removed (15 DPA)65.888269.577866.3019156.023



CDS Structure of MLOC_70967






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70967.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250405.1NoneNoneNoneNone
MLOC_70967.1CUST_5977_PI427708080AvailableAvailablecontig_58857 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55070.2 -1 0.0 896 437/480 (91%) 13103.m05983 protein UDP-glucose 6-dehydrogenase, putative, expressed
TAIR PP10 AT3G29360.2 -1 0.0 890 432/480 (90%) UDP-glucose 6-dehydrogenase family protein | chr3:11267375-11268817 REVERSE LENGTH=480