MLOC_70966 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.655713.582083.435894.13631
LEAShoots from the seedlings (10 cm shoot stage)6.499479.6561813.5128.79784
INF1Young developing inflorescences (5mm)00.015537400.019132
INF2Developing inflorescences (1-1.5 cm)0.02796010.039760800.0547907
ROORoots from the seedlings (10 cm shoot stage)4.583435.992185.47847.4374
NODDeveloping tillers at six leaf stage, 3rd internode0.08038140.06487770.1005740.224382
CAR5Developing grain, bracts removed (5 DPA)10.59469.440159.0248810.7911
CAR15Developing grain, bracts removed (15 DPA)6.508655.78215.9197316.6057



CDS Structure of MLOC_70966






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70966.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367930NoneNoneNoneNone
MLOC_70966.4CUST_5976_PI427708080AvailableAvailablecontig_58856 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g28124.1 +2 0.0 657 363/562 (65%) 13106.m02900 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G18170.1 +2 2e-72 245 143/400 (36%) Glycosyltransferase family 61 protein | chr3:6228393-6229547 FORWARD LENGTH=384