- Predicted Gene MLOC_70966
MLOC_70966 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.65571 | 3.58208 | 3.43589 | 4.13631 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.49947 | 9.65618 | 13.512 | 8.79784 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0155374 | 0 | 0.019132 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0279601 | 0.0397608 | 0 | 0.0547907 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.58343 | 5.99218 | 5.4784 | 7.4374 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0803814 | 0.0648777 | 0.100574 | 0.224382 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.5946 | 9.44015 | 9.02488 | 10.7911 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.50865 | 5.7821 | 5.91973 | 16.6057 |
CDS Structure of MLOC_70966
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70966.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g28124.1 |
+2 |
0.0 |
657 |
363/562 (65%) |
13106.m02900 protein glycosyltransferase, putative, expressed |
TAIR PP10 |
AT3G18170.1 |
+2 |
2e-72 |
245 |
143/400 (36%) |
Glycosyltransferase family 61 protein | chr3:6228393-6229547 FORWARD LENGTH=384 |