- Predicted Gene MLOC_70957
MLOC_70957 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70957_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70957_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 103.28 | 73.0964 | 69.732 | 80.4972 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 52.1456 | 21.6513 | 33.2433 | 29.3445 |
INF1 | Young developing inflorescences (5mm) | 81.0745 | 84.7577 | 91.2413 | 77.092 |
INF2 | Developing inflorescences (1-1.5 cm) | 82.1218 | 98.2898 | 105.325 | 109.011 |
ROO | Roots from the seedlings (10 cm shoot stage) | 105.745 | 97.2835 | 85.7149 | 109.351 |
NOD | Developing tillers at six leaf stage, 3rd internode | 98.5597 | 107.849 | 84.3902 | 291.966 |
CAR5 | Developing grain, bracts removed (5 DPA) | 77.0573 | 87.5823 | 74.108 | 82.8414 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.8049 | 20.2486 | 20.235 | 50.3053 |
CDS Structure of MLOC_70957
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70957.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g35814.1 |
-1 |
1e-142 |
409 |
205/216 (95%) |
13106.m03697 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT4G18800.1 |
-1 |
1e-125 |
364 |
183/215 (85%) |
| Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB GTPase homolog A1D | chr4:10320156-10321339 REVERSE LENGTH=214 |