- Predicted Gene MLOC_70917
MLOC_70917 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70917_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70917_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 35.6662 | 41.8965 | 40.8801 | 40.3908 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 40.8046 | 34.6879 | 30.071 | 31.2573 |
INF1 | Young developing inflorescences (5mm) | 57.0548 | 63.5256 | 63.7889 | 50.1291 |
INF2 | Developing inflorescences (1-1.5 cm) | 66.2905 | 62.765 | 67.4035 | 70.598 |
ROO | Roots from the seedlings (10 cm shoot stage) | 29.4866 | 38.6104 | 36.2213 | 46.6289 |
NOD | Developing tillers at six leaf stage, 3rd internode | 39.2196 | 47.5708 | 54.4611 | 173.481 |
CAR5 | Developing grain, bracts removed (5 DPA) | 45.1739 | 45.5493 | 50.1611 | 45.2625 |
CAR15 | Developing grain, bracts removed (15 DPA) | 27.3769 | 24.5513 | 22.8179 | 56.1071 |
CDS Structure of MLOC_70917
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70917.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46890.2 |
+1 |
0.0 |
665 |
434/481 (90%) |
13104.m04734 protein pre-mRNA-processing factor 31, putative, expressed |
TAIR PP10 |
AT1G60170.1 |
+1 |
9e-180 |
524 |
361/484 (75%) |
| Symbols: emb1220 | pre-mRNA processing ribonucleoprotein binding region-containing protein | chr1:22193008-22195177 FORWARD LENGTH=485 |