MLOC_70908 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8520550.8997161.178681.08628
LEAShoots from the seedlings (10 cm shoot stage)1.610524.189312.15992.34463
INF1Young developing inflorescences (5mm)000.0764710.0677751
INF2Developing inflorescences (1-1.5 cm)0.0577332000.0711143
ROORoots from the seedlings (10 cm shoot stage)1.097850.6412060.8241480.957837
NODDeveloping tillers at six leaf stage, 3rd internode0.4141610.155080.1211030.444763
CAR5Developing grain, bracts removed (5 DPA)0.7772970.978880.856320.980062
CAR15Developing grain, bracts removed (15 DPA)0.2872970.4481420.3371140.999242



CDS Structure of MLOC_70908






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70908.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70908.1CUST_13100_PI427708083AvailableAvailablecontig_58769 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35540.1 +3 9e-14 71 32/33 (97%) 13106.m03669 protein aminotransferase, classes I and II, domain containing protein, expressed
TAIR PP10 AT2G30970.2 +3 2e-11 63 28/33 (85%) | Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430