MLOC_70906 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.651475.754736.362626.06761
LEAShoots from the seedlings (10 cm shoot stage)17.105631.875648.174628.5952
INF1Young developing inflorescences (5mm)2.561173.039422.841712.52661
INF2Developing inflorescences (1-1.5 cm)2.974563.626132.6833.78665
ROORoots from the seedlings (10 cm shoot stage)12.85766.985116.427449.90956
NODDeveloping tillers at six leaf stage, 3rd internode15.859318.61916.177363.2047
CAR5Developing grain, bracts removed (5 DPA)5.035918.628826.066427.23108
CAR15Developing grain, bracts removed (15 DPA)2.810763.257182.723047.47233



CDS Structure of MLOC_70906






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70906.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366597NoneNoneNoneNone
MLOC_70906.2CUST_5967_PI427708080AvailableAvailablecontig_58768 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g16010.1 +1 2e-133 387 221/292 (76%) 13108.m01710 protein acetyltransferase, GNAT family, putative, expressed
TAIR PP10 AT4G28030.1 +1 6e-79 247 134/238 (56%) Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr4:13937748-13939131 REVERSE LENGTH=274