MLOC_70898 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.924115.175920.195116.0773
LEAShoots from the seedlings (10 cm shoot stage)7.1856611.230410.96837.30965
INF1Young developing inflorescences (5mm)4.780816.190494.073564.20988
INF2Developing inflorescences (1-1.5 cm)4.753623.381223.42944.13752
ROORoots from the seedlings (10 cm shoot stage)3.313752.789735.552523.25034
NODDeveloping tillers at six leaf stage, 3rd internode7.713275.086045.8346713.1304
CAR5Developing grain, bracts removed (5 DPA)5.277115.678345.367645.07748
CAR15Developing grain, bracts removed (15 DPA)1.297761.026231.375652.89717



CDS Structure of MLOC_70898






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70898.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357791NoneNoneNoneNone
MLOC_70898.2CUST_5963_PI427708080AvailableAvailablecontig_58752 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g37010.2 +2 6e-123 382 292/383 (76%) 13106.m10553 protein metal cation transporter, putative, expressed
TAIR PP10 AT1G10970.1 +2 1e-96 312 221/380 (58%) | Symbols: ZIP4, ATZIP4 | zinc transporter 4 precursor | chr1:3665201-3666933 REVERSE LENGTH=408