MLOC_70877 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.6519.55117.872122.7177
LEAShoots from the seedlings (10 cm shoot stage)8.927440.7594311.237663.20168
INF1Young developing inflorescences (5mm)58.91851.622345.921250.8152
INF2Developing inflorescences (1-1.5 cm)30.863845.730537.242150.5348
ROORoots from the seedlings (10 cm shoot stage)6.4010313.09414.557318.4224
NODDeveloping tillers at six leaf stage, 3rd internode0.06057270.1428160.0899060.482116
CAR5Developing grain, bracts removed (5 DPA)16.914418.724421.947422.8896
CAR15Developing grain, bracts removed (15 DPA)0.6739780.4959121.222321.99587



CDS Structure of MLOC_70877






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70877.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374300NoneNoneNoneNone
MLOC_70877.1CUST_5960_PI427708080AvailableAvailablecontig_58727 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g51110.2 +2 0.0 563 324/429 (76%) 13106.m05507 protein cyclin, putative, expressed
TAIR PP10 AT1G20610.1 +2 3e-117 361 225/427 (53%) | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273 REVERSE LENGTH=429