MLOC_70863 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.826737.993228.926417.14899
LEAShoots from the seedlings (10 cm shoot stage)7.135055.62672.436263.9627
INF1Young developing inflorescences (5mm)5.218944.074654.520743.74632
INF2Developing inflorescences (1-1.5 cm)4.152464.409133.688294.38321
ROORoots from the seedlings (10 cm shoot stage)7.508746.553598.326877.26313
NODDeveloping tillers at six leaf stage, 3rd internode17.281817.71479.6091347.4422
CAR5Developing grain, bracts removed (5 DPA)8.314158.499418.407727.86303
CAR15Developing grain, bracts removed (15 DPA)2.29262.242612.015385.12886



CDS Structure of MLOC_70863






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70863.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70863.2CUST_9520_PI427708083AvailableAvailablecontig_58702 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65720.1 +3 5e-79 255 133/191 (70%) 13101.m07105 protein expressed protein
TAIR PP10 AT5G67540.1 +3 3e-34 132 82/177 (46%) Arabinanase/levansucrase/invertase | chr5:26944253-26946058 REVERSE LENGTH=466