- Predicted Gene MLOC_70863
MLOC_70863 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.82673 | 7.99322 | 8.92641 | 7.14899 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.13505 | 5.6267 | 2.43626 | 3.9627 |
INF1 | Young developing inflorescences (5mm) | 5.21894 | 4.07465 | 4.52074 | 3.74632 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.15246 | 4.40913 | 3.68829 | 4.38321 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.50874 | 6.55359 | 8.32687 | 7.26313 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.2818 | 17.7147 | 9.60913 | 47.4422 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.31415 | 8.49941 | 8.40772 | 7.86303 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.2926 | 2.24261 | 2.01538 | 5.12886 |
CDS Structure of MLOC_70863
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70863.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g65720.1 |
+3 |
5e-79 |
255 |
133/191 (70%) |
13101.m07105 protein expressed protein |
TAIR PP10 |
AT5G67540.1 |
+3 |
3e-34 |
132 |
82/177 (46%) |
Arabinanase/levansucrase/invertase | chr5:26944253-26946058 REVERSE LENGTH=466 |