MLOC_70862 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.409428.630126.979428.141
LEAShoots from the seedlings (10 cm shoot stage)35.005527.330218.954226.4755
INF1Young developing inflorescences (5mm)57.553964.358357.281452.9123
INF2Developing inflorescences (1-1.5 cm)89.485176.741770.664196.3021
ROORoots from the seedlings (10 cm shoot stage)7.5338511.656511.163716.7108
NODDeveloping tillers at six leaf stage, 3rd internode19.278522.53222.321390.5674
CAR5Developing grain, bracts removed (5 DPA)34.735834.774737.809940.0365
CAR15Developing grain, bracts removed (15 DPA)16.830714.786814.103737.3037



CDS Structure of MLOC_70862






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70862.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70862.3CUST_15596_PI427708080AvailableAvailablecontig_58702 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56140.1 +2 0.0 1191 700/1015 (69%) 13101.m05932 protein expressed protein
TAIR PP10 AT5G65770.3 +2 0.0 570 329/799 (41%) | Symbols: LINC4 | little nuclei4 | chr5:26311587-26315610 FORWARD LENGTH=1010