- Predicted Gene MLOC_70839
MLOC_70839 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.9423 | 22.3736 | 18.7428 | 22.2754 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 70.3816 | 89.1842 | 65.2881 | 67.2302 |
| INF1 | Young developing inflorescences (5mm) | 27.359 | 28.8798 | 28.8054 | 26.0958 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.9077 | 26.1172 | 26.2693 | 30.5845 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.7181 | 9.93085 | 11.0155 | 12.9781 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 40.0446 | 29.9416 | 36.1428 | 107.208 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.3406 | 27.8417 | 24.8059 | 27.2351 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.4058 | 18.8114 | 16.3155 | 41.9803 |
CDS Structure of MLOC_70839
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70839.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g39270.1 |
-2 |
5e-174 |
496 |
270/296 (91%) |
13101.m04008 protein NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed |
| TAIR PP10 |
AT1G17650.1 |
-2 |
2e-148 |
431 |
223/284 (79%) |
| Symbols: GLYR2, GR2 | glyoxylate reductase 2 | chr1:6069594-6071964 REVERSE LENGTH=358 |
