MLOC_70834 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.568811.603522.356441.93557
LEAShoots from the seedlings (10 cm shoot stage)4.420891.583333.098982.24199
INF1Young developing inflorescences (5mm)2.125662.561261.543661.83637
INF2Developing inflorescences (1-1.5 cm)1.919521.816991.935352.13638
ROORoots from the seedlings (10 cm shoot stage)4.498062.313413.773072.81982
NODDeveloping tillers at six leaf stage, 3rd internode3.397234.407710.263113.9024
CAR5Developing grain, bracts removed (5 DPA)4.927475.516045.497125.33941
CAR15Developing grain, bracts removed (15 DPA)0.7096630.5139680.7506931.63005



CDS Structure of MLOC_70834






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70834.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377077NoneNoneNoneNone
MLOC_70834.1CUST_5956_PI427708080AvailableAvailablecontig_58650 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37040.1 +2 6e-111 342 239/331 (72%) 13107.m03807 protein PB1 domain containing protein, expressed
TAIR PP10 AT4G05150.1 +2 1e-33 134 87/198 (44%) Octicosapeptide/Phox/Bem1p family protein | chr4:2660339-2662675 FORWARD LENGTH=477