- Predicted Gene MLOC_70817
MLOC_70817 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70817_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70817_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0674878 | 0.0705701 | 0.0686779 | 0.0703712 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.4085 | 23.8115 | 3.8397 | 14.6038 |
INF1 | Young developing inflorescences (5mm) | 0.0224589 | 0.0231869 | 0 | 0.021621 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0723013 | 0.0656007 | 0.0272669 | 0.0639295 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.34389 | 0.363149 | 0.693528 | 0.65432 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0363336 | 0.0522139 | 0.392781 | 0.354496 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.4816 | 25.1026 | 26.4429 | 20.8396 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.08722 | 8.5993 | 7.64408 | 18.5924 |
CDS Structure of MLOC_70817
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70817.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g47970.1 |
-2 |
0.0 |
737 |
361/420 (86%) |
13111.m23059 protein AAA-type ATPase family protein, putative, expressed |
TAIR PP10 |
AT2G39730.3 |
-2 |
0.0 |
677 |
339/435 (78%) |
| Symbols: RCA | rubisco activase | chr2:16571174-16573345 REVERSE LENGTH=441 |