MLOC_70811 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08860120.1011970.1544440.0965336
LEAShoots from the seedlings (10 cm shoot stage)0.3337910.191780.06571270.161751
INF1Young developing inflorescences (5mm)0.6581430.4373960.5304870.401646
INF2Developing inflorescences (1-1.5 cm)0.4515540.6133830.1843390.440583
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.0083861100.061696
CAR5Developing grain, bracts removed (5 DPA)0.2093840.07623740.1863420.129537
CAR15Developing grain, bracts removed (15 DPA)0.1106380.02292150.1291590.16961



CDS Structure of MLOC_70811






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70811.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70811.1CUST_15591_PI427708080AvailableAvailablecontig_58588 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g40450.1 +1 1e-15 78 56/183 (31%) 13111.m04000 protein retrotransposon protein, putative, Ty1-copia subclass
TAIR PP10None-----