MLOC_70809 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.034014.605534.481385.2691
LEAShoots from the seedlings (10 cm shoot stage)20.29214.590415.424215.5927
INF1Young developing inflorescences (5mm)5.242882.036371.737912.76259
INF2Developing inflorescences (1-1.5 cm)0.5595021.184230.6608021.03129
ROORoots from the seedlings (10 cm shoot stage)0.1649942.92222.25833.49668
NODDeveloping tillers at six leaf stage, 3rd internode00.01737070.008529950.0571857
CAR5Developing grain, bracts removed (5 DPA)0.1417730.2618550.1768570.215764
CAR15Developing grain, bracts removed (15 DPA)0.1006030.08253360.1484820.28156



CDS Structure of MLOC_70809






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70809.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360760NoneNoneNoneNone
MLOC_70809.1CUST_5952_PI427708080AvailableAvailablecontig_58585 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g12790.1 -1 1e-123 370 218/359 (61%) 13102.m01399 protein GATA zinc finger domain containing protein, expressed
TAIR PP10 AT5G56860.1 -1 7e-19 89 68/175 (39%) | Symbols: GNC, GATA21 | GATA type zinc finger transcription factor family protein | chr5:22989630-22991351 REVERSE LENGTH=398