- Predicted Gene MLOC_70787
MLOC_70787 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.4914 | 23.4491 | 18.5423 | 22.1448 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.8097 | 16.9836 | 14.9772 | 15.8935 |
| INF1 | Young developing inflorescences (5mm) | 42.7278 | 43.8012 | 42.4598 | 39.0128 |
| INF2 | Developing inflorescences (1-1.5 cm) | 54.6486 | 56.2475 | 49.5812 | 63.3755 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.742 | 23.0807 | 17.2934 | 28.5632 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.62399 | 10.8162 | 12.5329 | 37.3866 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 44.2268 | 41.1778 | 40.2817 | 44.0216 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.1232 | 18.4724 | 16.4884 | 46.3121 |
CDS Structure of MLOC_70787
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70787.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g05310.4 |
-3 |
0.0 |
2081 |
1193/1286 (93%) |
13102.m00571 protein splicing factor 3B subunit 1, putative, expressed |
| TAIR PP10 |
AT5G64270.1 |
-3 |
0.0 |
1838 |
1041/1292 (81%) |
splicing factor, putative | chr5:25706909-25710718 FORWARD LENGTH=1269 |