MLOC_70737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.3610611.108910.30138.38394
LEAShoots from the seedlings (10 cm shoot stage)10.26417.038554.750755.26706
INF1Young developing inflorescences (5mm)17.426518.276114.000212.1632
INF2Developing inflorescences (1-1.5 cm)16.16914.159314.897614.1013
ROORoots from the seedlings (10 cm shoot stage)5.44117.8688710.79836.85461
NODDeveloping tillers at six leaf stage, 3rd internode3.818321.304932.344733.60458
CAR5Developing grain, bracts removed (5 DPA)8.332869.241249.957187.29121
CAR15Developing grain, bracts removed (15 DPA)1.954372.014170.9989413.65954



CDS Structure of MLOC_70737






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70737.1CUST_13096_PI427708083AvailableAvailablecontig_5845 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g27140.2 +2 4e-57 192 96/125 (77%) 13109.m02637 protein expressed protein
TAIR PP10 AT2G28230.1 +2 5e-33 125 56/117 (48%) TATA-binding related factor (TRF) of subunit 20 of Mediator complex | chr2:12037855-12039009 REVERSE LENGTH=219