MLOC_70730 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains702.817491.207499.858583.069
LEAShoots from the seedlings (10 cm shoot stage)174.338107.27155.381118.958
INF1Young developing inflorescences (5mm)6.957466.777725.279586.01447
INF2Developing inflorescences (1-1.5 cm)3.778083.028043.004993.89092
ROORoots from the seedlings (10 cm shoot stage)864.249713.501501.356814.343
NODDeveloping tillers at six leaf stage, 3rd internode1201.751159.63796.0272599.65
CAR5Developing grain, bracts removed (5 DPA)93.2763102.82495.5859103.919
CAR15Developing grain, bracts removed (15 DPA)10.17089.048211.545826.6362



CDS Structure of MLOC_70730






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70730.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250530.1NoneNoneNoneNone
MLOC_70730.1CUST_5939_PI427708080AvailableAvailablecontig_58436 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g38900.1 +2 3e-126 370 187/242 (77%) 13108.m04136 protein caffeoyl-CoA O-methyltransferase, putative, expressed
TAIR PP10 AT4G34050.1 +2 1e-83 260 131/227 (58%) | Symbols: CCoAOMT1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:16310844-16311973 FORWARD LENGTH=259