MLOC_70728 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7939981.079991.317471.08164
LEAShoots from the seedlings (10 cm shoot stage)3.70224.012014.740293.90272
INF1Young developing inflorescences (5mm)0.1318240.07870160.1270230.0967689
INF2Developing inflorescences (1-1.5 cm)0.3978360.4019430.9128120.561277
ROORoots from the seedlings (10 cm shoot stage)0.2803050.5988440.8688130.773391
NODDeveloping tillers at six leaf stage, 3rd internode0.08701890.1847080.09907830.660821
CAR5Developing grain, bracts removed (5 DPA)2.037361.80522.106851.90644
CAR15Developing grain, bracts removed (15 DPA)3.576332.759233.579147.43621



CDS Structure of MLOC_70728






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70728.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70728.1CUST_15581_PI427708080AvailableAvailablecontig_58432 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g29340.1 -3 0.0 616 329/410 (80%) 13103.m03372 protein domain of unknown function domain containing protein, expressed
TAIR PP10 AT1G23070.1 -3 3e-162 474 253/399 (63%) Protein of unknown function (DUF300) | chr1:8174011-8175758 REVERSE LENGTH=403