MLOC_70721 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.991792.763982.396733.88791
LEAShoots from the seedlings (10 cm shoot stage)00.26276500.17019
INF1Young developing inflorescences (5mm)0.06071560.06722770.07375340.168564
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)11.83848.538184.9588212.7573
NODDeveloping tillers at six leaf stage, 3rd internode2.522461.092340.020860820.3332
CAR5Developing grain, bracts removed (5 DPA)0000.133717
CAR15Developing grain, bracts removed (15 DPA)0000.605561



CDS Structure of MLOC_70721






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70721.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70721.1CUST_15579_PI427708080AvailableAvailablecontig_58427 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47700.1 +1 3e-37 129 58/72 (81%) 13105.m05055 protein LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT3G18280.1 +1 7e-25 96 36/71 (51%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr3:6267102-6267392 FORWARD LENGTH=96