MLOC_70708 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.526221.001420.5524.8887
LEAShoots from the seedlings (10 cm shoot stage)11.64346.207188.954048.43173
INF1Young developing inflorescences (5mm)18.705225.713428.598623.8421
INF2Developing inflorescences (1-1.5 cm)20.773820.981121.205226.1829
ROORoots from the seedlings (10 cm shoot stage)24.004124.712425.988935.9683
NODDeveloping tillers at six leaf stage, 3rd internode58.118654.119633.9216181.36
CAR5Developing grain, bracts removed (5 DPA)12.45412.437113.035114.484
CAR15Developing grain, bracts removed (15 DPA)3.897133.487284.6101510.5998



CDS Structure of MLOC_70708






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70708.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70708.1CUST_15577_PI427708080AvailableAvailablecontig_58412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46570.1 +3 0.0 678 331/389 (85%) 13106.m04921 protein galactosyltransferase, putative, expressed
TAIR PP10 AT1G05170.2 +3 0.0 550 269/394 (68%) Galactosyltransferase family protein | chr1:1491460-1493931 REVERSE LENGTH=407