MLOC_70696 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.257968.089569.839751.6374
LEAShoots from the seedlings (10 cm shoot stage)64.349946.103848.158139.5835
INF1Young developing inflorescences (5mm)53.895857.630655.588840.1059
INF2Developing inflorescences (1-1.5 cm)45.676258.774352.016448.4883
ROORoots from the seedlings (10 cm shoot stage)28.984844.020238.235939.7301
NODDeveloping tillers at six leaf stage, 3rd internode43.888448.806439.7397127.349
CAR5Developing grain, bracts removed (5 DPA)64.746867.281364.970252.6945
CAR15Developing grain, bracts removed (15 DPA)15.569718.173117.51932.9678



CDS Structure of MLOC_70696






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70696.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250925.1NoneNoneNoneNone
MLOC_70696.1CUST_5937_PI427708080AvailableAvailablecontig_58387 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35770.1 +2 1e-62 218 120/148 (81%) 13110.m03225 protein E2F-related protein, putative, expressed
TAIR PP10 AT2G23790.1 +2 1e-40 155 89/143 (62%) Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336