MLOC_70692 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5984570.5369020.2319550.524049
LEAShoots from the seedlings (10 cm shoot stage)7.3480211.49777.385177.40333
INF1Young developing inflorescences (5mm)6.272082.194552.977853.45785
INF2Developing inflorescences (1-1.5 cm)0.08459410.02724790.5547990.241894
ROORoots from the seedlings (10 cm shoot stage)2.371741.285141.186351.70522
NODDeveloping tillers at six leaf stage, 3rd internode13.37713.977911.549714.958
CAR5Developing grain, bracts removed (5 DPA)2.081220.8688010.6865981.32199
CAR15Developing grain, bracts removed (15 DPA)0.09180170.1647330.09959410.368476



CDS Structure of MLOC_70692






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70692.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365992NoneNoneNoneNone
MLOC_70692.1CUST_18403_PI427708080AvailableAvailablecontig_58380 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g41330.1 -2 3e-31 122 113/188 (60%) 13110.m03852 protein AP2 domain containing protein, expressed
TAIR PP10 AT4G17490.1 -2 1e-17 82 56/89 (63%) | Symbols: ATERF6, ERF-6-6, ERF6 | ethylene responsive element binding factor 6 | chr4:9752973-9753821 REVERSE LENGTH=282