- Predicted Gene MLOC_70692
MLOC_70692 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.598457 | 0.536902 | 0.231955 | 0.524049 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.34802 | 11.4977 | 7.38517 | 7.40333 |
INF1 | Young developing inflorescences (5mm) | 6.27208 | 2.19455 | 2.97785 | 3.45785 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0845941 | 0.0272479 | 0.554799 | 0.241894 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.37174 | 1.28514 | 1.18635 | 1.70522 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.3771 | 3.9779 | 11.5497 | 14.958 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.08122 | 0.868801 | 0.686598 | 1.32199 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0918017 | 0.164733 | 0.0995941 | 0.368476 |
CDS Structure of MLOC_70692
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70692.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g41330.1 |
-2 |
3e-31 |
122 |
113/188 (60%) |
13110.m03852 protein AP2 domain containing protein, expressed |
TAIR PP10 |
AT4G17490.1 |
-2 |
1e-17 |
82 |
56/89 (63%) |
| Symbols: ATERF6, ERF-6-6, ERF6 | ethylene responsive element binding factor 6 | chr4:9752973-9753821 REVERSE LENGTH=282 |