MLOC_70691 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.251869.597169.717068.71792
LEAShoots from the seedlings (10 cm shoot stage)6.625994.444845.141264.41715
INF1Young developing inflorescences (5mm)14.730515.665314.217512.3279
INF2Developing inflorescences (1-1.5 cm)12.397113.839414.390414.0942
ROORoots from the seedlings (10 cm shoot stage)4.38416.456037.089026.78373
NODDeveloping tillers at six leaf stage, 3rd internode6.119417.238965.0421419.6101
CAR5Developing grain, bracts removed (5 DPA)11.750412.052912.748211.1445
CAR15Developing grain, bracts removed (15 DPA)3.640643.535493.177857.92454



CDS Structure of MLOC_70691






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70691.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375442NoneNoneNoneNone
MLOC_70691.4CUST_18402_PI427708080AvailableAvailablecontig_5815 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49010.2 +2 0.0 699 364/409 (89%) 13101.m05093 protein ORC4 - Putative origin recognition complex subunit 4, expressed
TAIR PP10 AT2G01120.1 +2 3e-161 489 245/405 (60%) | Symbols: ORC4, ATORC4 | origin recognition complex subunit 4 | chr2:85444-88027 FORWARD LENGTH=418