- Predicted Gene MLOC_70664
MLOC_70664 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 85.7068 | 114.527 | 107.04 | 114.667 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.189 | 19.3405 | 0.567162 | 6.62181 |
INF1 | Young developing inflorescences (5mm) | 52.2807 | 84.9842 | 133.53 | 86.8606 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.0362 | 5.07699 | 9.40913 | 10.7316 |
ROO | Roots from the seedlings (10 cm shoot stage) | 90.3276 | 125.344 | 51.8119 | 132.97 |
NOD | Developing tillers at six leaf stage, 3rd internode | 51.2826 | 13.5294 | 3.92709 | 28.8707 |
CAR5 | Developing grain, bracts removed (5 DPA) | 58.029 | 40.7763 | 63.8771 | 56.4588 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.1772 | 2.25767 | 2.05446 | 5.73109 |
CDS Structure of MLOC_70664
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70664.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52860.1 |
+3 |
0.0 |
1352 |
652/851 (77%) |
13103.m05766 protein lipoxygenase, putative, expressed |
TAIR PP10 |
AT3G22400.1 |
+3 |
0.0 |
951 |
460/851 (54%) |
| Symbols: LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | chr3:7927011-7931167 FORWARD LENGTH=886 |