MLOC_70664 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains85.7068114.527107.04114.667
LEAShoots from the seedlings (10 cm shoot stage)3.18919.34050.5671626.62181
INF1Young developing inflorescences (5mm)52.280784.9842133.5386.8606
INF2Developing inflorescences (1-1.5 cm)14.03625.076999.4091310.7316
ROORoots from the seedlings (10 cm shoot stage)90.3276125.34451.8119132.97
NODDeveloping tillers at six leaf stage, 3rd internode51.282613.52943.9270928.8707
CAR5Developing grain, bracts removed (5 DPA)58.02940.776363.877156.4588
CAR15Developing grain, bracts removed (15 DPA)2.17722.257672.054465.73109



CDS Structure of MLOC_70664






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70664.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360423NoneNoneNoneNone
MLOC_70664.2CUST_5933_PI427708080AvailableAvailablecontig_58316 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52860.1 +3 0.0 1352 652/851 (77%) 13103.m05766 protein lipoxygenase, putative, expressed
TAIR PP10 AT3G22400.1 +3 0.0 951 460/851 (54%) | Symbols: LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | chr3:7927011-7931167 FORWARD LENGTH=886