MLOC_70659 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.829612.731212.294714.0323
LEAShoots from the seedlings (10 cm shoot stage)6.683095.40246.334495.20155
INF1Young developing inflorescences (5mm)4.205343.604013.105273.4905
INF2Developing inflorescences (1-1.5 cm)5.28317.335567.287968.39939
ROORoots from the seedlings (10 cm shoot stage)6.388725.277486.623046.89352
NODDeveloping tillers at six leaf stage, 3rd internode12.435510.628122.521637.5167
CAR5Developing grain, bracts removed (5 DPA)18.663120.998817.226321.6388
CAR15Developing grain, bracts removed (15 DPA)0.9059641.356841.025733.16888



CDS Structure of MLOC_70659






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70659.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365953NoneNoneNoneNone
MLOC_70659.2CUST_5931_PI427708080AvailableAvailablecontig_58307 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g37730.1 +2 4e-132 395 222/320 (69%) 13105.m03933 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT2G38090.1 +2 6e-71 234 126/209 (60%) Duplicated homeodomain-like superfamily protein | chr2:15945278-15946775 FORWARD LENGTH=298