MLOC_70646 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.909510.925711.260711.5416
LEAShoots from the seedlings (10 cm shoot stage)14.39425.436149.606347.85271
INF1Young developing inflorescences (5mm)11.39215.599737.09966.96079
INF2Developing inflorescences (1-1.5 cm)2.678333.790354.711534.06565
ROORoots from the seedlings (10 cm shoot stage)14.840412.18949.8658513.1808
NODDeveloping tillers at six leaf stage, 3rd internode81.060766.4013123.43201.844
CAR5Developing grain, bracts removed (5 DPA)7.938426.874767.783617.36725
CAR15Developing grain, bracts removed (15 DPA)2.466242.290571.888115.63137



CDS Structure of MLOC_70646






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70646.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366811NoneNoneNoneNone
MLOC_70646.2CUST_5930_PI427708080AvailableAvailablecontig_5828 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49320.1 +3 0.0 759 379/449 (84%) 13106.m05270 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G18180.1 +3 8e-83 281 168/463 (36%) Glycosyltransferase family 61 protein | chr3:6230270-6231878 FORWARD LENGTH=470