MLOC_70638 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.844669.800262.783648.157
LEAShoots from the seedlings (10 cm shoot stage)75.32268.487559.629553.5647
INF1Young developing inflorescences (5mm)55.425353.929552.931641.7074
INF2Developing inflorescences (1-1.5 cm)74.617266.391264.436568.0993
ROORoots from the seedlings (10 cm shoot stage)100.7999.66776.9614106.323
NODDeveloping tillers at six leaf stage, 3rd internode15.454420.31715.107657.337
CAR5Developing grain, bracts removed (5 DPA)62.465164.994280.622458.8668
CAR15Developing grain, bracts removed (15 DPA)31.788727.091730.194461.0231



CDS Structure of MLOC_70638






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70638.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70638.4CUST_15564_PI427708080AvailableAvailablecontig_58270 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08700.8 +3 0.0 734 392/434 (90%) 13101.m00920 protein GIGANTEA, putative, expressed
TAIR PP10 AT1G22770.1 +3 0.0 600 328/432 (76%) | Symbols: GI, FB | gigantea protein (GI) | chr1:8062398-8067447 FORWARD LENGTH=1173