MLOC_70636 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.238338.605117.823967.52444
LEAShoots from the seedlings (10 cm shoot stage)11.731710.65227.263738.93571
INF1Young developing inflorescences (5mm)15.236514.415415.169912.3549
INF2Developing inflorescences (1-1.5 cm)17.794719.674416.810120.2933
ROORoots from the seedlings (10 cm shoot stage)3.685778.649576.0109710.0638
NODDeveloping tillers at six leaf stage, 3rd internode11.744711.73468.5305541.3626
CAR5Developing grain, bracts removed (5 DPA)13.636412.840212.868412.8434
CAR15Developing grain, bracts removed (15 DPA)5.190634.193215.0888310.657



CDS Structure of MLOC_70636






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70636.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374536NoneNoneNoneNone
MLOC_70636.1CUST_5929_PI427708080AvailableAvailablecontig_58267 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g35080.1 -2 0.0 1153 648/1021 (63%) 13102.m03801 protein T-complex protein 11, putative, expressed
TAIR PP10 AT1G22930.2 -2 5e-167 527 383/1062 (36%) T-complex protein 11 | chr1:8118049-8121854 FORWARD LENGTH=1020