MLOC_7063 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.060726700.172477
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.1294950.5598560.3467210.829988
NODDeveloping tillers at six leaf stage, 3rd internode0.354450.1420251.152361.27769
CAR5Developing grain, bracts removed (5 DPA)0.061878800.06177970.128018
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_7063






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7063.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7063.1CUST_9475_PI427708083AvailableAvailablecontig_138579 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g39160.1 -1 5e-60 205 111/185 (60%) 13104.m03783 protein RNA-dependent RNA polymerase, putative, expressed
TAIR PP10 AT4G11130.1 -1 2e-35 134 81/179 (45%) | Symbols: RDR2, SMD1 | RNA-dependent RNA polymerase 2 | chr4:6780522-6784390 FORWARD LENGTH=1133