MLOC_70628 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.297726.783124.586331.2163
LEAShoots from the seedlings (10 cm shoot stage)7.414040.9982421.825522.88477
INF1Young developing inflorescences (5mm)56.042554.257542.424448.3258
INF2Developing inflorescences (1-1.5 cm)33.566649.399238.326551.8134
ROORoots from the seedlings (10 cm shoot stage)12.572720.354616.479625.0301
NODDeveloping tillers at six leaf stage, 3rd internode0.1845280.2792130.200150.818394
CAR5Developing grain, bracts removed (5 DPA)23.191227.934127.597130.187
CAR15Developing grain, bracts removed (15 DPA)1.527111.05881.481683.55963



CDS Structure of MLOC_70628






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70628.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359882NoneNoneNoneNone
MLOC_70628.2CUST_5926_PI427708080AvailableAvailablecontig_58254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g40170.1 -3 0.0 570 285/326 (87%) 13108.m04293 protein cyclin-dependent kinase B2-1, putative, expressed
TAIR PP10 AT1G20930.1 -3 7e-178 506 239/298 (80%) | Symbols: CDKB2;2 | cyclin-dependent kinase B2;2 | chr1:7292752-7294664 REVERSE LENGTH=315