- Predicted Gene MLOC_70628
MLOC_70628 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 31.2977 | 26.7831 | 24.5863 | 31.2163 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.41404 | 0.998242 | 1.82552 | 2.88477 |
INF1 | Young developing inflorescences (5mm) | 56.0425 | 54.2575 | 42.4244 | 48.3258 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.5666 | 49.3992 | 38.3265 | 51.8134 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.5727 | 20.3546 | 16.4796 | 25.0301 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.184528 | 0.279213 | 0.20015 | 0.818394 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.1912 | 27.9341 | 27.5971 | 30.187 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.52711 | 1.0588 | 1.48168 | 3.55963 |
CDS Structure of MLOC_70628
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70628.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g40170.1 |
-3 |
0.0 |
570 |
285/326 (87%) |
13108.m04293 protein cyclin-dependent kinase B2-1, putative, expressed |
TAIR PP10 |
AT1G20930.1 |
-3 |
7e-178 |
506 |
239/298 (80%) |
| Symbols: CDKB2;2 | cyclin-dependent kinase B2;2 | chr1:7292752-7294664 REVERSE LENGTH=315 |