MLOC_70611 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.529911.227561.605782.09968
LEAShoots from the seedlings (10 cm shoot stage)0.7324610.3236460.2505720.395085
INF1Young developing inflorescences (5mm)5.952386.370196.634416.22562
INF2Developing inflorescences (1-1.5 cm)5.345258.922855.481119.47516
ROORoots from the seedlings (10 cm shoot stage)1.874752.068052.437613.07588
NODDeveloping tillers at six leaf stage, 3rd internode00.06214990.08389150.349427
CAR5Developing grain, bracts removed (5 DPA)1.964482.760212.08872.97692
CAR15Developing grain, bracts removed (15 DPA)0.1836730.08990120.1538070.407964



CDS Structure of MLOC_70611






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70611.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70611.2CUST_15559_PI427708080AvailableAvailablecontig_58237 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58470.1 +2 1e-104 313 169/241 (70%) 13102.m06770 protein expressed protein
TAIR PP10 AT4G09060.1 +2 2e-18 86 76/315 (24%) unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). | chr4:5797781-5800253 REVERSE LENGTH=341