- Predicted Gene MLOC_70597
MLOC_70597 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70597_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70597_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 20.6361 | 18.5614 | 17.678 | 20.8343 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.1912 | 10.7962 | 14.8677 | 12.3101 |
INF1 | Young developing inflorescences (5mm) | 27.0318 | 25.6273 | 25.8151 | 23.6152 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.5574 | 25.7853 | 25.6592 | 27.5773 |
ROO | Roots from the seedlings (10 cm shoot stage) | 26.205 | 22.1451 | 22.1119 | 30.6196 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.14047 | 2.51704 | 4.63938 | 10.3028 |
CAR5 | Developing grain, bracts removed (5 DPA) | 20.5177 | 20.8077 | 20.5071 | 20.501 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.7197 | 9.04691 | 7.54488 | 21.5947 |
CDS Structure of MLOC_70597
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70597.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g48090.1 |
+2 |
0.0 |
623 |
319/398 (80%) |
13103.m05189 protein WD domain, G-beta repeat domain containing protein, expressed |
TAIR PP10 |
AT1G71840.1 |
+2 |
1e-135 |
403 |
202/391 (52%) |
transducin family protein / WD-40 repeat family protein | chr1:27022424-27024380 FORWARD LENGTH=407 |