MLOC_70584 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.04651.73832.755522.26516
LEAShoots from the seedlings (10 cm shoot stage)0.0913047000.0835658
INF1Young developing inflorescences (5mm)0.09085470.1046560.1118390.0952185
INF2Developing inflorescences (1-1.5 cm)0.0489403000.0617398
ROORoots from the seedlings (10 cm shoot stage)43.868211.916223.298218.8319
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.05800890.1091170.111160.100481
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_70584






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70584.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370085NoneNoneNoneNone
MLOC_70584.1CUST_5919_PI427708080AvailableAvailablecontig_58206 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15600.1 +1 2e-35 128 63/95 (66%) 13106.m01725 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G02850.1 +1 3e-22 91 47/96 (49%) | Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129