- Predicted Gene MLOC_70558
MLOC_70558 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70558_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70558_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 16.8175 | 23.0676 | 20.0591 | 21.5857 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.84114 | 7.55025 | 5.92825 | 6.41559 |
INF1 | Young developing inflorescences (5mm) | 38.4448 | 52.4373 | 46.0529 | 40.1564 |
INF2 | Developing inflorescences (1-1.5 cm) | 57.6896 | 48.7709 | 46.1651 | 56.3303 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.44312 | 14.5828 | 10.7572 | 16.2553 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.575879 | 0.592461 | 0.302622 | 1.71909 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.52446 | 8.23489 | 8.44361 | 8.54218 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.9125 | 19.7758 | 16.9998 | 43.5775 |
CDS Structure of MLOC_70558
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70558.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g10800.3 |
+1 |
0.0 |
940 |
511/611 (84%) |
13103.m01213 protein BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
TAIR PP10 |
AT2G14820.1 |
+1 |
2e-170 |
520 |
316/597 (53%) |
| Symbols: NPY2 | Phototropic-responsive NPH3 family protein | chr2:6358864-6361300 FORWARD LENGTH=634 |