- Predicted Gene MLOC_70556
MLOC_70556 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.1539 | 28.7182 | 28.267 | 25.8348 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.9311 | 18.9542 | 17.2433 | 17.1264 |
| INF1 | Young developing inflorescences (5mm) | 38.2929 | 44.334 | 44.6725 | 32.1925 |
| INF2 | Developing inflorescences (1-1.5 cm) | 46.8541 | 46.1529 | 45.6039 | 46.2242 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.7301 | 27.3272 | 23.0383 | 30.3435 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.4144 | 24.7478 | 17.2637 | 78.7308 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.3074 | 29.6109 | 34.7593 | 28.7703 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.5808 | 15.8168 | 15.4772 | 33.5739 |
CDS Structure of MLOC_70556
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70556.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g51180.1 |
+1 |
0.0 |
1256 |
636/680 (94%) |
13102.m05818 protein cullin, putative, expressed |
| TAIR PP10 |
AT1G26830.1 |
+1 |
0.0 |
1066 |
536/680 (79%) |
| Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 | chr1:9296063-9298374 FORWARD LENGTH=732 |