- Predicted Gene MLOC_70552
MLOC_70552 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70552_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70552_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 19.7715 | 15.9946 | 17.1159 | 17.0014 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.0386 | 8.4282 | 5.83222 | 7.07987 |
INF1 | Young developing inflorescences (5mm) | 12.4933 | 12.1713 | 13.2936 | 10.2458 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.7741 | 14.0954 | 12.8786 | 14.7906 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.7133 | 17.8383 | 16.0774 | 20.5803 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.5776 | 8.4877 | 5.02375 | 24.3601 |
CAR5 | Developing grain, bracts removed (5 DPA) | 21.6883 | 24.23 | 22.5494 | 21.4668 |
CAR15 | Developing grain, bracts removed (15 DPA) | 37.0367 | 39.6649 | 34.6574 | 82.9458 |
CDS Structure of MLOC_70552
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70552.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g32968.2 |
-2 |
3e-117 |
343 |
174/212 (82%) |
13109.m03311 protein emp24/gp25L/p24 family protein, putative, expressed |
TAIR PP10 |
AT3G07680.1 |
-2 |
1e-95 |
287 |
143/204 (70%) |
emp24/gp25L/p24 family/GOLD family protein | chr3:2455627-2456652 FORWARD LENGTH=208 |