MLOC_70535 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.806331.563311.78491.53348
LEAShoots from the seedlings (10 cm shoot stage)0.6362931.044372.396761.03631
INF1Young developing inflorescences (5mm)1.583211.631651.760311.25536
INF2Developing inflorescences (1-1.5 cm)1.358261.683731.839031.53975
ROORoots from the seedlings (10 cm shoot stage)1.100431.639851.383581.54591
NODDeveloping tillers at six leaf stage, 3rd internode0.4075920.522410.5555751.43718
CAR5Developing grain, bracts removed (5 DPA)0.1975270.4131370.3553590.267146
CAR15Developing grain, bracts removed (15 DPA)0.0728990.1472750.07092050.209191



CDS Structure of MLOC_70535






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70535.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70535.1CUST_15544_PI427708080AvailableAvailablecontig_5813 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46440.1 -2 5e-43 164 167/288 (58%) 13106.m04908 protein expressed protein
TAIR PP10 AT2G34630.2 +3 9e-29 84 39/50 (78%) | Symbols: GPPS, GPS1 | geranyl diphosphate synthase 1 | chr2:14578689-14581632 FORWARD LENGTH=422