- Predicted Gene MLOC_70534
MLOC_70534 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.063 | 10.107 | 9.21829 | 10.7183 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.07548 | 11.3588 | 17.4106 | 10.6211 |
| INF1 | Young developing inflorescences (5mm) | 12.894 | 12.6564 | 11.2132 | 10.1514 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.3836 | 10.4134 | 9.38675 | 9.99335 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.08224 | 12.5865 | 11.7246 | 14.622 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.2288 | 2.16384 | 4.96244 | 9.05379 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.8675 | 4.72336 | 4.81044 | 4.42207 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.26909 | 1.77439 | 1.66479 | 3.25964 |
CDS Structure of MLOC_70534
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70534.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g46450.1 |
+3 |
0.0 |
676 |
362/414 (87%) |
13106.m04909 protein polyprenyl synthetase, putative, expressed |
| TAIR PP10 |
AT2G34630.2 |
+3 |
4e-175 |
502 |
261/355 (74%) |
| Symbols: GPPS, GPS1 | geranyl diphosphate synthase 1 | chr2:14578689-14581632 FORWARD LENGTH=422 |