MLOC_70534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.06310.1079.2182910.7183
LEAShoots from the seedlings (10 cm shoot stage)8.0754811.358817.410610.6211
INF1Young developing inflorescences (5mm)12.89412.656411.213210.1514
INF2Developing inflorescences (1-1.5 cm)8.383610.41349.386759.99335
ROORoots from the seedlings (10 cm shoot stage)9.0822412.586511.724614.622
NODDeveloping tillers at six leaf stage, 3rd internode2.22882.163844.962449.05379
CAR5Developing grain, bracts removed (5 DPA)4.86754.723364.810444.42207
CAR15Developing grain, bracts removed (15 DPA)1.269091.774391.664793.25964



CDS Structure of MLOC_70534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70534.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374105NoneNoneNoneNone
MLOC_70534.1CUST_5914_PI427708080AvailableAvailablecontig_5813 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46450.1 +3 0.0 676 362/414 (87%) 13106.m04909 protein polyprenyl synthetase, putative, expressed
TAIR PP10 AT2G34630.2 +3 4e-175 502 261/355 (74%) | Symbols: GPPS, GPS1 | geranyl diphosphate synthase 1 | chr2:14578689-14581632 FORWARD LENGTH=422