- Predicted Gene MLOC_70501
MLOC_70501 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 30.5677 | 43.8647 | 40.5739 | 40.7285 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 132.102 | 205.216 | 137.895 | 141.947 |
| INF1 | Young developing inflorescences (5mm) | 56.7574 | 60.7929 | 54.9978 | 49.7918 |
| INF2 | Developing inflorescences (1-1.5 cm) | 43.9648 | 48.674 | 44.8777 | 50.1881 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.8782 | 38.1518 | 34.3048 | 46.7559 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 46.5381 | 44.0765 | 59.2169 | 164.226 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 146.022 | 146.853 | 148.579 | 140.682 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 158.28 | 133.507 | 138.198 | 322.884 |
CDS Structure of MLOC_70501
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70501.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g06560.1 |
+3 |
0.0 |
1042 |
492/552 (89%) |
13106.m00677 protein starch synthase, putative, expressed |
| TAIR PP10 |
AT5G24300.2 |
+3 |
0.0 |
815 |
371/514 (72%) |
| Symbols: SSI1 | Glycogen/starch synthases, ADP-glucose type | chr5:8266934-8270860 FORWARD LENGTH=652 |