MLOC_70500 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.110940.968437.54542.707
LEAShoots from the seedlings (10 cm shoot stage)26.016520.960317.361821.1881
INF1Young developing inflorescences (5mm)96.476783.807174.496379.6125
INF2Developing inflorescences (1-1.5 cm)72.000275.69375.771891.2392
ROORoots from the seedlings (10 cm shoot stage)8.4848926.098527.01136.5136
NODDeveloping tillers at six leaf stage, 3rd internode0.6863440.939374.430386.35562
CAR5Developing grain, bracts removed (5 DPA)50.382750.126550.915456.7085
CAR15Developing grain, bracts removed (15 DPA)14.395514.435510.599134.2313



CDS Structure of MLOC_70500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70500.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359200NoneNoneNoneNone
MLOC_70500.1CUST_5910_PI427708080AvailableAvailablecontig_58076 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g36890.1 -2 2e-154 466 291/532 (55%) 13104.m03568 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
TAIR PP10 AT4G25340.1 -2 1e-74 253 196/516 (38%) | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN 53 | chr4:12959657-12962632 REVERSE LENGTH=477