- Predicted Gene MLOC_70500
MLOC_70500 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70500_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70500_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 28.1109 | 40.9684 | 37.545 | 42.707 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.0165 | 20.9603 | 17.3618 | 21.1881 |
INF1 | Young developing inflorescences (5mm) | 96.4767 | 83.8071 | 74.4963 | 79.6125 |
INF2 | Developing inflorescences (1-1.5 cm) | 72.0002 | 75.693 | 75.7718 | 91.2392 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.48489 | 26.0985 | 27.011 | 36.5136 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.686344 | 0.93937 | 4.43038 | 6.35562 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.3827 | 50.1265 | 50.9154 | 56.7085 |
CAR15 | Developing grain, bracts removed (15 DPA) | 14.3955 | 14.4355 | 10.5991 | 34.2313 |
CDS Structure of MLOC_70500
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70500.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g36890.1 |
-2 |
2e-154 |
466 |
291/532 (55%) |
13104.m03568 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
TAIR PP10 |
AT4G25340.1 |
-2 |
1e-74 |
253 |
196/516 (38%) |
| Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN 53 | chr4:12959657-12962632 REVERSE LENGTH=477 |